• Home
  • Pipelines
  • Resources
    • Components
    • Modules
    • Subworkflows

    • Configs
    • Shared configs

    • Plugins & Actions
    • nft-utils
    • setup-nextflow
    • setup-nf-test
  • Docs
  • Community
    • What's happening
    • Advisories
    • Blog

    • Events
    • Bytesize Talks
    • Hackathons
    • Training
    • Talks
    • Weekly Helpdesks

    • Programs and groups
    • Special interest groups
    • In-progress RFCs
    • Mentorships
    • Contributors
    • Shop new
    • Connect game 👾
  • About
    • About nf-core
    • Stickers
    • Governance
    • Marketing
    • Code of conduct

    • Publications
    • Statistics

    • Join nf-core
    • Select theme
    • Light
    • Dark
    • System
    • Select theme
    • Light
    • Dark
    • System
    Join nf-core Join nf-core

nf-core/hlatyping
Edit

Precision HLA typing from next-generation sequencing data

dnahlahla-typingimmunologyoptitypepersonalized-medicinerna
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/hlatyping
  • Introduction
  • Usage
  • Parameters
  • Output
  • Releases
    • 2.1.0
    • 2.0.0
    • 1.2.0
    • 1.1.5
    • 1.1.4
    • 1.1.3
    • 1.1.2
    • 1.1.1
    • 1.1.0
    • 1.0.0
    • 1.0.0-rc1
    • dev
Introduction Usage Parameters Output Releases
  • 2.1.0
  • 2.0.0
  • 1.2.0
  • 1.1.5
  • 1.1.4
  • 1.1.3
  • 1.1.2
  • 1.1.1
  • 1.1.0
  • 1.0.0
  • 1.0.0-rc1
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
subscribers
161
stars
77
open issues
12
open PRs
1
last release
10 months ago
last update
10 months ago
included modules
cat_fastqfastqcgunzipmultiqcoptitype and 4 more modules
included subworkflows
utils_nextflow_pipelineutils_nfcore_pipelineutils_nfschema_plugin
contributors
Github user sven1103
Github user christopher-mohr
Github user apeltzer
Github user SpikyClip
Github user mapo9
Github user ggabernet
Github user jonasscheid
Github user nvk747
Github user ewels
Github user maxulysse
Github user KochTobi
Github user pditommaso
Github user KevinMenden
get help
Ask a question on Slack Open an issue on GitHub

See the source code for this page

Making awesome workflows since 2018.

Supported by:

+ + +
See the source code for this website on GitHub:
https://github.com/nf-core/website