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nf-core/sopa
Edit

Nextflow version of Sopa - spatial omics pipeline and analysis

segmentationspatial-omicsspatial-proteomicsspatial-transcriptomicsspatialdata
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/sopa
  • Introduction
  • Usage
  • Parameters
  • Output
    • dev
Introduction Usage Parameters Output
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
subscribers
3
stars
13
open issues
3
open PRs
2
last release
not yet released
last update
about 5 hours ago
included modules
spaceranger_countuntar
included subworkflows
utils_nextflow_pipelineutils_nfcore_pipelineutils_nfschema_plugin
contributors
Github user quentinblampey
Github user mashehu
get help
Ask a question on Slack Open an issue on GitHub

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